Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ASCL1

Cell type

Cell type Class
Lung
Cell type
NCI-H128
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Small Cell

Attributes by original data submitter

Sample

source_name
Tumor
cell line
H128
classification
SCLC
ascl1 expression
ASCL1high
antibody
mouse anti-ASCL1 antibody (BD Biosciences, cat# 556604)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
19854916
Reads aligned (%)
58.2
Duplicates removed (%)
30.6
Number of peaks
3916 (qval < 1E-05)

hg38

Number of total reads
19854916
Reads aligned (%)
59.9
Duplicates removed (%)
29.3
Number of peaks
3842 (qval < 1E-05)

Base call quality data from DBCLS SRA