Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
cell type
CD4+ T cells
chip antibody
PolIISer2 (Abcam; Cat no. ab5095; Lot no. 782031)
treatment
JQ1 treated

Sequenced DNA Library

library_name
GSM823381: PolIISer2_JQ1treated_Tcell_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
50289843
Reads aligned (%)
85.0
Duplicates removed (%)
33.6
Number of peaks
2396 (qval < 1E-05)

hg19

Number of total reads
50289843
Reads aligned (%)
84.1
Duplicates removed (%)
35.6
Number of peaks
2413 (qval < 1E-05)

Base call quality data from DBCLS SRA