Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD4

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
cell type
CD4+ T cells
chip antibody
BRD4 (Abcam; Cat no. ab46199; Lot no. 613288)
treatment
JQ1 treated

Sequenced DNA Library

library_name
GSM823379: BRD4_JQ1treated_Tcell_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
30219700
Reads aligned (%)
42.1
Duplicates removed (%)
47.5
Number of peaks
3578 (qval < 1E-05)

hg38

Number of total reads
30219700
Reads aligned (%)
43.9
Duplicates removed (%)
45.7
Number of peaks
3477 (qval < 1E-05)

Base call quality data from DBCLS SRA