Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Embryo

Cell type

2-4h embryos

NA

NA

Sample

source_name

tl10b embryos

developmental stage

2-4 hr after egg deposition

genotype/variation

tl10b

chip antibody

H3K4me1 (Active Motif Carlsbad, CA, catalog #39635)

barcode kit

Biooscientific

library kit

Millipore

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seq was performed according to He et al. (2011) with whole cell extract (WCE) derived from 100 mg embryos per ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

dm6

Number of total reads

13165326

Reads aligned (%)

92.1

Duplicates removed (%)

36.1

Number of peaks

3887 (qval < 1E-05)

dm3

Number of total reads

13165326

Reads aligned (%)

92.3

Duplicates removed (%)

33.0

Number of peaks

4891 (qval < 1E-05)