Antigen

Antigen Class

TFs and others

Antigen

zen

Cell type

Cell type Class

Embryo

Cell type

2-4h embryos

NA

NA

Sample

source_name

gd7 embryos

developmental stage

2-4 hr after egg deposition

genotype/variation

gd7

chip antibody

Custom GenScript Zen (full length)

barcode kit

NEB-next-ChIP

library kit

NEB-next-ChIP

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seq was performed according to He et al. (2011) with whole cell extract (WCE) derived from 100 mg embryos per ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2500

dm3

Number of total reads

12469890

Reads aligned (%)

70.8

Duplicates removed (%)

26.0

Number of peaks

11814 (qval < 1E-05)

dm6

Number of total reads

12469890

Reads aligned (%)

67.6

Duplicates removed (%)

29.2

Number of peaks

11717 (qval < 1E-05)