Curated Sample Data
- Genome
- dm3
- Antigen Class
- Histone
- Antigen
- H3K27me3
- Cell type Class
- Embryo
- Cell type
- 2-4h embryos
Cell type information
- NA
- NA
Attributes by Original Data Submitter
- source_name
- gd7 embryos
- developmental stage
- 2-4 hr after egg deposition
- genotype/variation
- gd7
- chip antibody
- H3K27ac (Active Motif Carlsbad, CA, catalog #39133)
- barcode kit
- none
- library kit
- NEB-next-DNA
Metadata from Sequence Read Archive
Library Description
- library_strategy
- ChIP-Seq
- library_source
- GENOMIC
- library_selection
- ChIP
- library_construction_protocol
- ChIP-seq was performed according to He et al. (2011) with whole cell extract (WCE) derived from 100 mg embryos per ChIP
Platform Information
- instrument_model
- Illumina Genome Analyzer IIx
- Number of total reads
- 39221792
- Reads aligned (%)
- 92.9
- Duplicates removed (%)
- 54.8
- Number of peaks
- 11574 (qval < 1E-05)