Antigen

Antigen Class

TFs and others

Antigen

SPI1

Cell type

Cell type Class

Blood

Cell type

THP-1

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

source_name

THP-1, PU.1 ChIP-Seq

cell line

THP-1

cell type

monocytic cells

treatment 1

differentiation with PMA (50ng/ml;40hrs)

treatment 2

1.5 h of 1microM Rosiglitazone

chip antibody

anti-PU.1

antibody vendor

Santa Cruz

Sequenced DNA Library

library_name

GSM624143: PU.1_ChIPseq

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

16490701

Reads aligned (%)

98.0

Duplicates removed (%)

3.9

Number of peaks

25678 (qval < 1E-05)

hg19

Number of total reads

16490701

Reads aligned (%)

97.2

Duplicates removed (%)

4.6

Number of peaks

25717 (qval < 1E-05)