Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines

Attributes by original data submitter

Sample

isolate
YRI population
age
NA
biomaterial_provider
Coriell
sex
pooled male and female
tissue
blood
cell_line
LCLs

Sequenced DNA Library

library_name
H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
804451442
Reads aligned (%)
98.0
Duplicates removed (%)
43.3
Number of peaks
115944 (qval < 1E-05)

hg19

Number of total reads
804451442
Reads aligned (%)
97.3
Duplicates removed (%)
44.1
Number of peaks
118575 (qval < 1E-05)

Base call quality data from DBCLS SRA