Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
DAXX

Cell type

Cell type Class
Prostate
Cell type
PC-3
Primary Tissue
Prostate
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
Prostate
cell line
PC3
source tissue
Prostate
genotype
DAXX knock-down
antibody
anti-DAXX (sc-7001)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
23013092
Reads aligned (%)
88.0
Duplicates removed (%)
4.0
Number of peaks
26851 (qval < 1E-05)

hg19

Number of total reads
23013092
Reads aligned (%)
87.4
Duplicates removed (%)
4.9
Number of peaks
26866 (qval < 1E-05)

Base call quality data from DBCLS SRA