SRX101773
GSM820537: Input IMR90

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
human IMR90 fibroblasts
cell line
IMR90
cell type
fetal lung fibroblast
antibody
none

Sequenced DNA Library

library_name
GSM820537: Input_IMR90
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22670403
Reads aligned (%)
73.0
Duplicates removed (%)
3.5
Number of peaks
2538 (qval < 1E-05)

hg19

Number of total reads
22670403
Reads aligned (%)
72.6
Duplicates removed (%)
4.2
Number of peaks
2671 (qval < 1E-05)

Base call quality data from DBCLS SRA