SRX101163
GSM722419: TCF7L2 K562bio r2 Childrens

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF7L2

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
TCF7L2 ChIP-seq K562 BIO
cell line
K562
chip antibody
TCF7L2
antibody catalog number
Santa Cruz SC-8631

Sequenced DNA Library

library_name
GSM722419: TCF7L2_K562bio_r2_Childrens
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28313282
Reads aligned (%)
63.7
Duplicates removed (%)
16.1
Number of peaks
3903 (qval < 1E-05)

hg19

Number of total reads
28313282
Reads aligned (%)
63.0
Duplicates removed (%)
17.5
Number of peaks
3947 (qval < 1E-05)

Base call quality data from DBCLS SRA