Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Kidney

Cell type

Kidney Pelvis

MeSH Description

The flattened, funnel-shaped expansion connecting the URETER to the KIDNEY CALICES.

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

University of Washington, Congenital Defects Lab. Ian Glass

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Fetal Renal Pelvis

TISSUE_DEPOT

UW

COLLECTION_METHOD

fetal

DONOR_ID

H-24078

DONOR_AGE

day 127

DONOR_HEALTH_STATUS

NA

DONOR_SEX

male

DONOR_ETHNICITY

NA

sample_term_id

UBERON_0001224

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

36492252

Reads aligned (%)

98.5

Duplicates removed (%)

6.7

Number of peaks

36971 (qval < 1E-05)

hg19

Number of total reads

36492252

Reads aligned (%)

98.0

Duplicates removed (%)

7.6

Number of peaks

36637 (qval < 1E-05)