Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

CD4+

NA

NA

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

FHCRC HEIMFELD

BIOMATERIAL_TYPE

Primary Cell

CELL_TYPE

CD4 Primary Cells

MARKERS

CD4

DONOR_ID

RO 01689

DONOR_AGE

year 34

DONOR_HEALTH_STATUS

NA

DONOR_SEX

female

DONOR_ETHNICITY

Caucasian

PASSAGE_IF_EXPANDED

NA

sample_term_id

CL_0000837

Sequenced DNA Library

library_name

DS17329

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

38474171

Reads aligned (%)

95.6

Duplicates removed (%)

10.5

Number of peaks

28096 (qval < 1E-05)

hg19

Number of total reads

38474171

Reads aligned (%)

95.1

Duplicates removed (%)

11.7

Number of peaks

28135 (qval < 1E-05)