Antigen

Antigen Class

TFs and others

Antigen

TCF7L2

Cell type

Cell type Class

Pancreas

Cell type

PANC-1

Tissue

Pancreas/Duct

Disease

Epithelioid Carcinoma

Sample

source_name

PANC-1

biomaterial_provider

ATCC

lab

USC

lab description

Farnham - University of Southern California

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

PANC-1

cell organism

human

cell description

pancreatic carcinoma, (PMID: 1140870) PANC-1 was established from a pancreatic carcinoma, which was extracted via pancreatico-duodenectomy specimen from a 56-year-old Caucasian individual. Malignancy of this cell line was verified via in vitro and in vivo assays.

cell karyotype

cancer

cell lineage

endoderm

cell sex

M

treatment

None

treatment description

No special treatment or protocol applies

antibody

TCF7L2

antibody antibodydescription

Rabbit monoclonal. Antibody Target: TCF7L2

antibody targetdescription

TCF4

antibody vendorname

Cell Signaling Technology

antibody vendorid

2569

control

UCDavis

control description

Input library was prepared at UC Davis.

control

UCDavis

control description

Input library was prepared at UC Davis.

controlid

wgEncodeEH002070

replicate

1

replicate description

tier 1

Sequenced DNA Library

library_name

GSM816437: USC_ChipSeq_PANC-1_TCF4_UCDavis

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

41422677

Reads aligned (%)

93.7

Duplicates removed (%)

10.0

Number of peaks

11380 (qval < 1E-05)

hg19

Number of total reads

41422677

Reads aligned (%)

92.8

Duplicates removed (%)

11.7

Number of peaks

11404 (qval < 1E-05)