Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOSL1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
biomaterial_provider
ATCC
datatype
ChipSeq
datatype description
Chromatin IP Sequencing
antibody antibodydescription
Rabbit polyclonal IgG, epitope mapping at the N-terminus of FOSL1 of human origin. Antibody Target: FOSL1
antibody targetdescription
The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation. (provided by RefSeq)
antibody vendorname
Santa Cruz Biotechnology
antibody vendorid
sc-183
controlid
SL2455
labexpid
SL3187,SL2349
replicate
1,2
softwareversion
MACS
antibody
FOSL1_(SC-183)
antibody antibodydescription
Rabbit polyclonal IgG, epitope mapping at the N-terminus of FOSL1 of human origin.
antibody targetdescription
The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation. (provided by RefSeq)
antibody vendorname
Santa Cruz Biotech
antibody vendorid
sc-183
treatment
None
treatment description
No special treatment or protocol applies
protocol
v041610.1
protocol description
2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)
controlid
SL2455
labexpid
SL2349
replicate
1
replicate description
tier 1

Sequenced DNA Library

library_name
GSM803439: HudsonAlpha_ChipSeq_K562_FOSL1_(SC-183)_v041610.1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
56936340
Reads aligned (%)
58.9
Duplicates removed (%)
30.9
Number of peaks
12296 (qval < 1E-05)

hg38

Number of total reads
56936340
Reads aligned (%)
59.8
Duplicates removed (%)
30.1
Number of peaks
12211 (qval < 1E-05)

Base call quality data from DBCLS SRA