Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NCOA3

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
estrogen
comment
Santa Cruz: RAC3 (M397)
chip antibody
RAC3
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_name
GSM801063: RAC3 E2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
6857584
Reads aligned (%)
70.4
Duplicates removed (%)
25.0
Number of peaks
1170 (qval < 1E-05)

hg38

Number of total reads
6857584
Reads aligned (%)
76.3
Duplicates removed (%)
20.3
Number of peaks
1144 (qval < 1E-05)

Base call quality data from DBCLS SRA