Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
estrogen
comment
In house Rabbit polyclonal: peptide AGVP(Rme2a)PGVPC
chip antibody
CBPR2151m peptide AGVP(Rme2a)PGVPC
chip antibody manufacturer
In house

Sequenced DNA Library

library_name
GSM801054: CBPR2151m E2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
7716368
Reads aligned (%)
61.5
Duplicates removed (%)
29.2
Number of peaks
3248 (qval < 1E-05)

hg38

Number of total reads
7716368
Reads aligned (%)
63.7
Duplicates removed (%)
27.4
Number of peaks
3078 (qval < 1E-05)

Base call quality data from DBCLS SRA