SRX100262
GSM801053: CBPR768m EtOH

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
ethanol
comment
In house Rabbit polyclonal: peptide ISPS(Rme2a)MPQPC
chip antibody
CBPR768m peptide ISPS(Rme2a)MPQPC
chip antibody manufacturer
In house

Sequenced DNA Library

library_name
GSM801053: CBPR768m EtOH
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7971224
Reads aligned (%)
46.6
Duplicates removed (%)
51.2
Number of peaks
8652 (qval < 1E-05)

hg19

Number of total reads
7971224
Reads aligned (%)
46.3
Duplicates removed (%)
52.4
Number of peaks
8804 (qval < 1E-05)

Base call quality data from DBCLS SRA