SRX100261
GSM801052: CBPR768m E2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
estrogen
comment
In house Rabbit polyclonal: peptide ISPS(Rme2a)MPQPC
chip antibody
CBPR768m peptide ISPS(Rme2a)MPQPC
chip antibody manufacturer
In house

Sequenced DNA Library

library_name
GSM801052: CBPR768m E2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
9151494
Reads aligned (%)
55.1
Duplicates removed (%)
51.9
Number of peaks
7930 (qval < 1E-05)

hg19

Number of total reads
9151494
Reads aligned (%)
54.8
Duplicates removed (%)
53.1
Number of peaks
8034 (qval < 1E-05)

Base call quality data from DBCLS SRA