SRX100259
GSM801050: CBP EtOH

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
ethanol
comment
Santa Cruz: CBP (A22)
chip antibody
CBP
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_name
GSM801050: CBP EtOH
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14602986
Reads aligned (%)
87.1
Duplicates removed (%)
44.9
Number of peaks
5746 (qval < 1E-05)

hg19

Number of total reads
14602986
Reads aligned (%)
86.4
Duplicates removed (%)
47.1
Number of peaks
6190 (qval < 1E-05)

Base call quality data from DBCLS SRA