SRX100258
GSM801049: CBP E2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Breast
Cell type
H3396
NA
NA

Attributes by original data submitter

Sample

source_name
H3396 cells
cell line
H3396 cells
treatment
estrogen
comment
Santa Cruz: CBP (A22)
chip antibody
CBP
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_name
GSM801049: CBP E2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
7824231
Reads aligned (%)
94.4
Duplicates removed (%)
8.5
Number of peaks
478 (qval < 1E-05)

hg19

Number of total reads
7824231
Reads aligned (%)
93.8
Duplicates removed (%)
9.9
Number of peaks
650 (qval < 1E-05)

Base call quality data from DBCLS SRA