SRX100256
GSM809016: MEF2C control ChIP seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MEF2C

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HUVECs_DMSO-4h
cell type
Human umbilical vein cells
passage
within 6 passage
chip antibody
MEF2C
treatment
DMSO for 4 hr

Sequenced DNA Library

library_name
GSM809016: MEF2C control ChIP seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
36970106
Reads aligned (%)
76.5
Duplicates removed (%)
77.7
Number of peaks
260 (qval < 1E-05)

hg19

Number of total reads
36970106
Reads aligned (%)
75.7
Duplicates removed (%)
79.8
Number of peaks
240 (qval < 1E-05)

Base call quality data from DBCLS SRA