SRX100255
GSM809015: H3K27Ac NS ChIP seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HUVECs_NS
cell type
Human umbilical vein cells
passage
within 6 passage
chip antibody
H3K27ac
treatment
none

Sequenced DNA Library

library_name
GSM809015: H3K27Ac NS ChIP seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40742855
Reads aligned (%)
95.8
Duplicates removed (%)
10.9
Number of peaks
69906 (qval < 1E-05)

hg19

Number of total reads
40742855
Reads aligned (%)
95.5
Duplicates removed (%)
11.1
Number of peaks
69797 (qval < 1E-05)

Base call quality data from DBCLS SRA