Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc cells
chip antibody
CP190
cell line
Kc167 Drosophila Embryonic
cell cycle phase
Interphase

Sequenced DNA Library

library_name
GSM807541: CP190_interphase_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
25432118
Reads aligned (%)
12.2
Duplicates removed (%)
49.2
Number of peaks
10498 (qval < 1E-05)

dm6

Number of total reads
25432118
Reads aligned (%)
11.9
Duplicates removed (%)
50.1
Number of peaks
9973 (qval < 1E-05)

Base call quality data from DBCLS SRA