Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Gonad
Cell type
Spermatocytes
MeSH Description
Male germ cells derived from SPERMATOGONIA. The euploid primary spermatocytes undergo MEIOSIS and give rise to the haploid secondary spermatocytes which in turn give rise to SPERMATIDS.

Attributes by original data submitter

Sample

source_name
Spermatocyte
cell type
Spermatocyte
antibody
None

Sequenced DNA Library

library_name
GSM810673: Spermatocyte_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
39959769
Reads aligned (%)
84.5
Duplicates removed (%)
9.5
Number of peaks
418 (qval < 1E-05)

mm9

Number of total reads
39959769
Reads aligned (%)
84.3
Duplicates removed (%)
9.5
Number of peaks
441 (qval < 1E-05)

Base call quality data from DBCLS SRA