Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Neural
Cell type
D54
NA
NA

Attributes by original data submitter

Sample

source_name
glioblastoma
cell type
glioblastoma
cell line
H54
antibody
cMYC

Sequenced DNA Library

library_name
GSM808774: H54_cMYC_REP2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
52983469
Reads aligned (%)
47.6
Duplicates removed (%)
14.9
Number of peaks
1406 (qval < 1E-05)

hg38

Number of total reads
52983469
Reads aligned (%)
48.7
Duplicates removed (%)
13.6
Number of peaks
1383 (qval < 1E-05)

Base call quality data from DBCLS SRA