SRX099876
GSM808765: FB0167P CTCF REP2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Others
Cell type
FB0167P
NA
NA

Attributes by original data submitter

Sample

source_name
Progeria fibroblast
cell type
Progeria fibroblast
cell line
FB0167P
antibody
CTCF

Sequenced DNA Library

library_name
GSM808765: FB0167P_CTCF_REP2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30942529
Reads aligned (%)
74.4
Duplicates removed (%)
19.5
Number of peaks
36356 (qval < 1E-05)

hg19

Number of total reads
30942529
Reads aligned (%)
73.9
Duplicates removed (%)
20.7
Number of peaks
36325 (qval < 1E-05)

Base call quality data from DBCLS SRA