Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Others
Cell type
FB0167P
NA
NA

Attributes by original data submitter

Sample

source_name
Progeria fibroblast
cell type
Progeria fibroblast
cell line
FB0167P
antibody
CTCF

Sequenced DNA Library

library_name
GSM808764: FB0167P_CTCF_REP1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
29861264
Reads aligned (%)
61.9
Duplicates removed (%)
23.7
Number of peaks
34657 (qval < 1E-05)

hg38

Number of total reads
29861264
Reads aligned (%)
62.8
Duplicates removed (%)
23.0
Number of peaks
34741 (qval < 1E-05)

Base call quality data from DBCLS SRA