Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Others
Cell type
FB8470
NA
NA

Attributes by original data submitter

Sample

source_name
Normal child fibroblasts
cell type
Normal child fibroblasts
cell line
FB8470
antibody
CTCF

Sequenced DNA Library

library_name
GSM808760: FB8470_CTCF_REP2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
45332116
Reads aligned (%)
34.0
Duplicates removed (%)
22.4
Number of peaks
43935 (qval < 1E-05)

hg38

Number of total reads
45332116
Reads aligned (%)
34.3
Duplicates removed (%)
22.0
Number of peaks
44133 (qval < 1E-05)

Base call quality data from DBCLS SRA