SRX099861
GSM810644: CNC ChIPSeq 1 and Seq2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
cnc

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
WPP
developmental stage
WPP
antibody name
CNC
manufacturer
White Lab
catalog
N/A
strain
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM810644: CNC_ChIPSeq_1 and Seq2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
62780156
Reads aligned (%)
87.2
Duplicates removed (%)
36.0
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
62780156
Reads aligned (%)
87.5
Duplicates removed (%)
33.9
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA