SRX099709
GSM808750: InputDNA ChIPSeq rep1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic myoblast
NA
NA

Attributes by original data submitter

Sample

source_name
primary myotubes
strain
C57BL/6
cell type
myotubes induced from wild type mouse fetal (E18.5) primary myoblasts
passages
17
chip antibody
none

Sequenced DNA Library

library_name
GSM808750: InputDNA_ChIPSeq_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22292318
Reads aligned (%)
92.8
Duplicates removed (%)
8.9
Number of peaks
309 (qval < 1E-05)

mm9

Number of total reads
22292318
Reads aligned (%)
92.6
Duplicates removed (%)
9.0
Number of peaks
374 (qval < 1E-05)

Base call quality data from DBCLS SRA