Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBL1

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
lung fibroblasts
cell line
IMR90 human primary lung embryo fibroblasts
cell type
contact-inhibited IMR90
infection
mock-infected
passages
6 to 10
chip target
p107
chip antibody
sc-C18

Sequenced DNA Library

library_name
GSM802404: mock-infected p107_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
136670300
Reads aligned (%)
65.8
Duplicates removed (%)
22.0
Number of peaks
20307 (qval < 1E-05)

hg38

Number of total reads
136670300
Reads aligned (%)
66.9
Duplicates removed (%)
21.1
Number of peaks
20549 (qval < 1E-05)

Base call quality data from DBCLS SRA