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Install and launch IGV before selecting data to visualize
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Biotin
wikigenes
PDBj
CellType: MLL-AF9 leukemic cell
ATCC
MeSH
RIKEN BRC
SRX099358
GSM721212: MLL-AF9 ChIPSeq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Biotin
Cell type
Cell type Class
Blood
Cell type
MLL-AF9 leukemic cell
NA
NA
Attributes by original data submitter
Sample
source_name
MLL-AF9 transformed blasts
strain
C57BL/6
cell origin
5-FU treated BM cells transduced with HA-Bio-MLL-AF9 and BirA
chip antibody
streptavidin beads
Sequenced DNA Library
library_name
GSM721212: MLL-AF9_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
29223656
Reads aligned (%)
91.1
Duplicates removed (%)
24.8
Number of peaks
519 (qval < 1E-05)
mm9
Number of total reads
29223656
Reads aligned (%)
90.9
Duplicates removed (%)
24.9
Number of peaks
616 (qval < 1E-05)
Base call quality data from
DBCLS SRA