SRX099357
GSM721211: H3K79me2 normal karyotype huAML ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
Leukemic blast cell
NA
NA

Attributes by original data submitter

Sample

source_name
human leukemic blasts
cell origin
diagnostic sample (pre-treatment)
chip antibody
H3K79me2

Sequenced DNA Library

library_name
GSM721211: H3K79me2_normal_karyotype_huAML_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27684097
Reads aligned (%)
90.8
Duplicates removed (%)
10.5
Number of peaks
4692 (qval < 1E-05)

hg19

Number of total reads
27684097
Reads aligned (%)
90.5
Duplicates removed (%)
10.8
Number of peaks
4716 (qval < 1E-05)

Base call quality data from DBCLS SRA