SRX099261
GSM801544: input unstim 3T3; Mus musculus; other

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
3T3 fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
input_unstim_3T3
cell type
3T3 fibroblasts
chip antibody
none

Sequenced DNA Library

library_name
GSM801544: input_unstim_3T3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38330880
Reads aligned (%)
77.2
Duplicates removed (%)
17.3
Number of peaks
896 (qval < 1E-05)

mm9

Number of total reads
38330880
Reads aligned (%)
77.0
Duplicates removed (%)
17.4
Number of peaks
974 (qval < 1E-05)

Base call quality data from DBCLS SRA