SRX099230
GSM804013: GATA1 Replicate1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GATA1

Cell type

Cell type Class
Blood
Cell type
PBMC
Tissue
blood
Lineage
mesoderm
Description
peripheral blood mononuclear cells

Attributes by original data submitter

Sample

source_name
erythroblasts
cell type
primary human PBMC derived erythroblasts
chip antibody
GATA1 made in-house

Sequenced DNA Library

library_name
GSM804013: GATA1 Replicate1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17625785
Reads aligned (%)
91.0
Duplicates removed (%)
31.0
Number of peaks
17667 (qval < 1E-05)

hg19

Number of total reads
17625785
Reads aligned (%)
90.6
Duplicates removed (%)
31.6
Number of peaks
17676 (qval < 1E-05)

Base call quality data from DBCLS SRA