SRX097621
GSM796334: WCE-309 ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
Schneider's Drosophila Line 2
cell type
S2; Schneider's Drosophila Line 2; Marco Blanchette's Lab
cell line
S2
antibody
in house none

Sequenced DNA Library

library_name
GSM796334: WCE-309 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
37304434
Reads aligned (%)
96.4
Duplicates removed (%)
74.6
Number of peaks
4863 (qval < 1E-05)

dm3

Number of total reads
37304434
Reads aligned (%)
96.7
Duplicates removed (%)
70.8
Number of peaks
6208 (qval < 1E-05)

Base call quality data from DBCLS SRA