Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ice1

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
Schneider's Drosophila Line 2
cell type
S2; Schneider's Drosophila Line 2; Marco Blanchette's Lab
cell line
S2
antibody
in house Rabbit anti-Ice1 (CG13550, aa 1-192)

Sequenced DNA Library

library_name
GSM796329: Ice1 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm3

Number of total reads
30067888
Reads aligned (%)
88.7
Duplicates removed (%)
60.2
Number of peaks
6909 (qval < 1E-05)

dm6

Number of total reads
30067888
Reads aligned (%)
88.5
Duplicates removed (%)
63.0
Number of peaks
5685 (qval < 1E-05)

Base call quality data from DBCLS SRA