SRX097296
GSM790737: SuUR 3SG orc2 ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

source_name
third instar salivary gland from SuUR
genotype
SuUR
antibody
orc2 (steve bell lab, MIT)
tissue
third instar salivary gland

Sequenced DNA Library

library_name
GSM790737: SuUR_3SG_orc2_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
22573162
Reads aligned (%)
42.5
Duplicates removed (%)
42.1
Number of peaks
7146 (qval < 1E-05)

dm6

Number of total reads
22573162
Reads aligned (%)
42.3
Duplicates removed (%)
42.2
Number of peaks
7142 (qval < 1E-05)

Base call quality data from DBCLS SRA