Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CEBPA

Cell type

Cell type Class
Blood
Cell type
U-937
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
CEBPA_U937
cell line
U937
chip antibody
CEBPA
chip antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM788369: CEBPA ChIP-Seq U937 bmp4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
37542998
Reads aligned (%)
41.7
Duplicates removed (%)
34.5
Number of peaks
1048 (qval < 1E-05)

hg38

Number of total reads
37542998
Reads aligned (%)
42.8
Duplicates removed (%)
33.3
Number of peaks
841 (qval < 1E-05)

Base call quality data from DBCLS SRA