Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMAD1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-C/EBPA
cell line
K562-C/EBPA
chip antibody
SMAD1
chip antibody vendor
Santa Cruz
cell type
K562-C/EBPA

Sequenced DNA Library

library_name
GSM788365: SMAD1 ChIP-Seq K562-C/EBPA bmp4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
31545640
Reads aligned (%)
62.3
Duplicates removed (%)
21.0
Number of peaks
31916 (qval < 1E-05)

hg38

Number of total reads
31545640
Reads aligned (%)
63.2
Duplicates removed (%)
20.4
Number of peaks
31965 (qval < 1E-05)

Base call quality data from DBCLS SRA