Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
U-937
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
Input ChIP-Seq U937 BIO
cell line
U937
chip antibody
WCE
antibody catalog number
None WCE

Sequenced DNA Library

library_name
GSM722427: WCE_U937bio_r1_100505_6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
23000696
Reads aligned (%)
89.1
Duplicates removed (%)
8.1
Number of peaks
1521 (qval < 1E-05)

hg19

Number of total reads
23000696
Reads aligned (%)
88.6
Duplicates removed (%)
9.1
Number of peaks
1590 (qval < 1E-05)

Base call quality data from DBCLS SRA