SRX097098
GSM722426: TCF7L2 U937bio r1 100505 7

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF7L2

Cell type

Cell type Class
Blood
Cell type
U-937
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
TCF7L2 ChIP-seq U937 BIO
cell line
U937
chip antibody
TCF7L2
antibody catalog number
Santa Cruz SC-8631

Sequenced DNA Library

library_name
GSM722426: TCF7L2_U937bio_r1_100505_7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17357493
Reads aligned (%)
41.8
Duplicates removed (%)
45.5
Number of peaks
2260 (qval < 1E-05)

hg19

Number of total reads
17357493
Reads aligned (%)
41.5
Duplicates removed (%)
46.7
Number of peaks
2349 (qval < 1E-05)

Base call quality data from DBCLS SRA