Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Input ChIP-Seq K562
cell line
K562
chip antibody
WCE
antibody catalog number
None WCE

Sequenced DNA Library

library_name
GSM722421: WCE_K562bio_r1_100608_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
26204199
Reads aligned (%)
90.2
Duplicates removed (%)
1.4
Number of peaks
570 (qval < 1E-05)

hg19

Number of total reads
26204199
Reads aligned (%)
89.7
Duplicates removed (%)
2.4
Number of peaks
835 (qval < 1E-05)

Base call quality data from DBCLS SRA