SRX097091
GSM722418: TCF7L2 K562bio r1 100106 7

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF7L2

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
TCF7L2 ChIP-seq K562 BIO
cell line
K562
chip antibody
TCF7L2
antibody catalog number
Santa Cruz SC-8631

Sequenced DNA Library

library_name
GSM722418: TCF7L2_K562bio_r1_100106_7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
8492226
Reads aligned (%)
74.4
Duplicates removed (%)
4.9
Number of peaks
1775 (qval < 1E-05)

hg19

Number of total reads
8492226
Reads aligned (%)
73.8
Duplicates removed (%)
5.5
Number of peaks
1792 (qval < 1E-05)

Base call quality data from DBCLS SRA