SRX097081
GSM722408: WCE CD34prog bio r1 100826 6

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD34 Hematopoietic stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
Input ChIP-seq CD34+ progenitors BIO
cell type
Hematopoietic Stem & Progenitor Cells
chip antibody
WCE
antibody catalog number
None WCE

Sequenced DNA Library

library_name
GSM722408: WCE_CD34prog_bio_r1_100826_6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27156989
Reads aligned (%)
84.2
Duplicates removed (%)
1.4
Number of peaks
960 (qval < 1E-05)

hg19

Number of total reads
27156989
Reads aligned (%)
83.8
Duplicates removed (%)
1.9
Number of peaks
932 (qval < 1E-05)

Base call quality data from DBCLS SRA