SRX097075
GSM722402: TCF7L2 CD34prog bio r2 101105 4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF7L2

Cell type

Cell type Class
Blood
Cell type
CD34 Hematopoietic stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
TCF7L2 ChIP-seq CD34 progenitors BIO
cell type
Hematopoietic Stem & Progenitor Cells
chip antibody
TCF7L2
antibody catalog number
Santa Cruz SC-8631

Sequenced DNA Library

library_name
GSM722402: TCF7L2_CD34prog_bio_r2_101105_4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
32377395
Reads aligned (%)
76.2
Duplicates removed (%)
23.6
Number of peaks
6436 (qval < 1E-05)

hg19

Number of total reads
32377395
Reads aligned (%)
75.6
Duplicates removed (%)
24.4
Number of peaks
6565 (qval < 1E-05)

Base call quality data from DBCLS SRA