SRX096367
GSM790216: EWS502 H3K27me3 ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Bone
Cell type
EWS502
NA
NA

Attributes by original data submitter

Sample

source_name
Ewing Sarcoma cells
cell line
EWS502
chip antibody
H3K27me3

Sequenced DNA Library

library_name
GSM790216: EWS502_H3K27me3_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
32050624
Reads aligned (%)
98.8
Duplicates removed (%)
2.5
Number of peaks
3743 (qval < 1E-05)

hg19

Number of total reads
32050624
Reads aligned (%)
98.2
Duplicates removed (%)
3.0
Number of peaks
3853 (qval < 1E-05)

Base call quality data from DBCLS SRA