Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NCOA1

Cell type

Cell type Class
Breast
Cell type
LY2
NA
NA

Attributes by original data submitter

Sample

source_name
Mammary gland epithelial cells, tamoxifen treated, SRC1 ChIP
cell line
LY2
cell type
mammary gland epithelial cells
treatment
tamoxifen
chip antibody
SRC1
antibody vendor
Santa Cruz
antibody catalog number
sc-8995
antibody lot
G2607
read length
35

Sequenced DNA Library

library_name
GSM717979: LY2_SRC1_TAMOX
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
12183958
Reads aligned (%)
58.3
Duplicates removed (%)
31.3
Number of peaks
11801 (qval < 1E-05)

hg38

Number of total reads
12183958
Reads aligned (%)
59.7
Duplicates removed (%)
30.2
Number of peaks
11936 (qval < 1E-05)

Base call quality data from DBCLS SRA