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Install and launch IGV before selecting data to visualize
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: MYC
wikigenes
PDBj
CellType: BL-41
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX095396
GSM762710: BL41 ChIP
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
MYC
Cell type
Cell type Class
Blood
Cell type
BL-41
Primary Tissue
Blood
Tissue Diagnosis
Malignant Lymphoma - Burkitts Type
Attributes by original data submitter
Sample
source_name
BL41
strain
B-cell lymphoma cell line
cell type
B-cell
chip antibody
MYC antibody (N-262 Santa Cruz, CA, USA)
Sequenced DNA Library
library_name
GSM762710: BL41_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
4199158
Reads aligned (%)
78.4
Duplicates removed (%)
11.3
Number of peaks
9665 (qval < 1E-05)
hg19
Number of total reads
4199158
Reads aligned (%)
77.8
Duplicates removed (%)
12.1
Number of peaks
9719 (qval < 1E-05)
Base call quality data from
DBCLS SRA